Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926042.1_cds_XP_016474140.1_66195
CDS Infomation

[gene=LOC107795945] [db_xref=GeneID:107795945] [protein=lysine-specific histone demethylase 1 homolog 3-like] [protein_id=XP_016474140.1] [location=complement(join(16593..16658,17785..17859,17991..18704,20782..21188,21579..21672,21758..21763))] [gbkey=CDS]
Sequence

ATGCTGGACTCCTTGGGCAAAGATGGGACCCAACTCTTGCGTCATTGTGTTCGTATACTA
GTAAAGGTCTCAACTGATTTGCTTGCAGTCCGACTGTCAGGTATCGGGAAAACTGTAAAA
GAAAAAGTCTGTGTGCATACTAGCCGTGACATACGTGCCATAGCAAGTCAGCTTGTCAAT
GTGTGGATAGAAATTTTTCGAAAGGAGAAGGCTGCTAATGGTGGTCTGAAATTATTAAGG
CAATCCACTGCTGCTGATACTTCAAAGAGTAAACACACTGGAGCATCTGGAAAACCACCA
ATTCGCAATGCCAACAACAAGAAGCTGAATGTCAAGCTAGCCACGTTGGAAACTATTCCA
GATGTTGAACCATCAACCTCTCAAGCTTCAGTAGGAAGGCAAAATGATACCACTGAGGAA
AGGCAAGATTTTCCCATGTCTGAGGATGAAAAGGCTGCATTCGCCGCTGCAGAAGCTGCT
CGTGTTGCTGCTCTTGCAGCTGCTGAGGCTTATGCTTCATCTGGTGCTAAGTGTAACATG
CCTCTGCAGCTTCCTAAGATACCCTCATTTCACAAATTTGCTAGACGGGAACAATATGCA
AATGATGAGTCTGACATCAGAAGGAATTGGCCTGGTGGTGCAGTAGGAAGGCAAGATTGC
TTATCTGAAATAGACTCCCGCAACTGCCGAGTGAGGGATTGGTCTGTTGATTTTTCTGCT
GCTGGTGTGAACCTTGACAGTTCAAGAATGTCTGTTGATAATCGCTCGCAGCGTAGCCTC
TCAAATGACAATGCATGTCAGTTTAATTTTAGGGAGCACTCAGGCGAAAGTGCACCTGTA
GATAGTAGTATATTCACCAAAGCGTGGGTTGATAGCTCAAGTAGTATAGGGATAAAGGAT
TACAATGCCATTGAAATGTGGCAATGTCAAGCAGCTGCTGCTAATTCTGATTTCTATGAT
CCAGTGATGCATGTCACTGATGAAGAGGATTCAAACATGAGTTCCAAAATGCTTATGAGG
AAGCATGATGTGTTAGTGTGTGAGAGCTCCGCTTCACAAATTACTGTAAATAAAGAGATG
TTGCATGATCAGCCGAAAGGAGCAGAAAGAATCAAGCAGGCTGTTGTAGATTATGTTGGA
TCTTTGCTGATGCCTCTTTATAAAGCACGGAAACTCGATAAGGAAGGGTATAAATCAATA
ATGAAGAAAACTGCTACAAAGGTAATGGAACATGCCACTGATGCTGAAAAGTCAATGCTG
GTGTACGAATTTCTTGATTCCAAACGTAAAAACAAGATTAGAGATTTCGTAGACAAGTTG
ATAGAAAGGTATATGCTGATGAAGCCGGGTGCAAAATCATAA

Peptide Sequence

PEP ID

XP_016474140.1
PEP Infomation

PREDICTED: lysine-specific histone demethylase 1 homolog 3-like [Nicotiana tabacum]
Sequence

MLDSLGKDGTQLLRHCVRILVKVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVN
VWIEIFRKEKAANGGLKLLRQSTAADTSKSKHTGASGKPPIRNANNKKLNVKLATLETIP
DVEPSTSQASVGRQNDTTEERQDFPMSEDEKAAFAAAEAARVAALAAAEAYASSGAKCNM
PLQLPKIPSFHKFARREQYANDESDIRRNWPGGAVGRQDCLSEIDSRNCRVRDWSVDFSA
AGVNLDSSRMSVDNRSQRSLSNDNACQFNFREHSGESAPVDSSIFTKAWVDSSSSIGIKD
YNAIEMWQCQAAAANSDFYDPVMHVTDEEDSNMSSKMLMRKHDVLVCESSASQITVNKEM
LHDQPKGAERIKQAVVDYVGSLLMPLYKARKLDKEGYKSIMKKTATKVMEHATDAEKSML
VYEFLDSKRKNKIRDFVDKLIERYMLMKPGAKS

Transcript Sequence

Gene sequence data has not been registered.